RNase

General Information (Source: NCBI Gene,UniProt)

Text mining Term RNase
UniProt ID D6C783_HELAN
Name Copia-like retrotransposon
Gene Names HACRE1
Taxonomy Helianthus annuus

General annotation

Function
Subcellular location

Gene Ontology

GO:0003676 nucleic acid binding MF
GO:0008270 zinc ion binding MF
GO:0015074 DNA integration BP

Sequence

>gi|295799979|emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus]
MNQEFVKLDRFDGQNYTRWADKVKFMLVVLKLYYILDPDLPAIPDDPPGEAGELPNEDLARQRLIRKEAE
DLCLGHIKNSLSDRLYDLYAPIKSARELWKALEDKYKAHEEGTNKYLIAKYLDFQMVDDKSILEQVHELQ
VLVNKLTALSIPLPEIFQVGVIIAKLPPGWKDFSKRMMHKSEDYSLDELLKHLRIEEETRNRDKRGKVGS
SVNHVAGGSGQKGKGASSRNKKFTAPKKKEFKKSQHTNNHQPKRSGKCHVCGETGHYARECSQRKSGSTV
GSTSAIDVEKVTNLVANVGLGEVNMLSQYTRIVACRGWFLDSGATVHVCGNRGSFLTYAPVPQGTVVVCA
DGHRVEVRGKGTVRLNFRDGQVVTLQDVLHVPGITKGLVSADKFDRNGYKLVIKNLRVKFSLNDIYVGQA
KNTGGMYRLDLAEDGIGEEEDSDQGGVSVIDGFGNESDSDSGGSVSSSIGECNAIGFDLNEIMSSDYIAC
SISLWHKRLAHTNIKNIEKMQTKGLLKLNDKDFEKCETCVKSKFTKKPFPSVPKRNTSLLELIHSDICEL
NGVLTRGGKRYFISFCDDSSRYLYVYLLHSKDEAFEAFKIYKAEVEKQKEKRIKILRSDRGGEYFNRRFD
AFCEEEGIIHERTAPYTPQQNGLAERKNRTLVEMANCMLNQSGLPRNMWGEAVLTACYVHNRITSRVIPT
SPYELWKGRKPNLEHLRVWGCLAYYRVPDPKTLKLGERAFKSVFIGYASHSKSYRLLDDESGIVVESRDV
EFFENKFSRDDENSNGTTTSSTSEKRVQPSPIVEEPRKSTRVRKEKSYGDDFFSYLVEGTQKKVMREVIF
AVNLDDDPKTFNEAMSSRDAPLWKEAVNDEMDSIMGNGTWELADLPKGKKPIGSKWIFKRKYHPDGSISA
YKARLVAKGYRQREGVDYFDTYAPVARIGSIRTLIAVSALKGLYIHQMDVKTAFLNGYLNEEIYLEQPEG
FVMPGQENKVCRLIKSLYGLKQAPKQWHERFDTTVTAFGFRHNSADRCIYTKCEPGYTVVICLYVDDMLI
ISTHLEGISETKKYLSLNFKMKDLGEVDTILGIKVKRAGSQISLSQSHYIEKILTKFQHLNIKEFNTPFD
PSVKLNVNSGRAVAQLEYASAIGSMMYATHCTRPDIAFAVSKLSQYTVNPGTEHWKAVGRVLGYLKRTSN
LELTYTSSSRILEGYSDASWIDRTNDSKSTSGWIFTLAGGAVSWASKKQTCIAHSTMEAELIALAAAGKE
AEWIRDLLTDIRLWDVPMPCIPMYCDSEATLSKVYNAVYNGGSRHIGLRHNYVRQLLESGTIKVVYVKTS
KNLADPFTKPLTRDLVVNTARDMGLKPQ

Options for BLAST

Database:

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Descriptions:

Database Cross Reference

Ensembl Gene
UniGene
PDB
RefSeq
Pfam PF07727
PF00098
PF00665